Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015790769.1_cds_XP_016503437.1_1604
CDS Infomation

[gene=LOC107821516] [db_xref=GeneID:107821516] [protein=receptor-like protein kinase HAIKU2] [protein_id=XP_016503437.1] [location=join(1286..3875,4001..4374)] [gbkey=CDS]
Sequence

ATGACCCTTTTGCCCTTTCCAATTTCAACAATGGCCAGAATTCCAAAACTCCAAAACTCC
CTCCAAATTCTTGCTATTTTCTTGTTTTTGGTTTTGTTTTTTCAGCCATCCAAGTCCTTA
ACTGCTGAAACTCAGGCCCTTTTACATTTCAAAGAGCAACTCAATGACCCTTTGAATTAC
TTGGATTCTTGGAAAGACTCAGAATCTCCTTGTAAATTCAATGGAATTACATGTGATCAA
AAGACTGGTCTTGTTACTGCAATTTCCCTTGACAACAAATCCATTTCTGGGGTGATTTCC
CCTTCAATATTTTCACTTCAAAGCCTCACTTCTTTAGTGCTACCTTCAAATTCTTTATCT
GGGGTCCTTCCAAGTGAAATAACCAACTGCACCAATCTCAAAATCTTGAATGTCACTGGA
AATAACATGAATGGAACCATACCTGATTTATCTAAGTTGACTAACTTAGAAGTTTTGGAC
TTGTCTATAAACTACTTTTCAGGAGAATTCCCATCTTGGGTTGGAAATTTGACTAGTTTG
GTTGCACTAGGCCTAGGGGATAATGACTTTGTTGAAGGTAAAATTCCTGAGACTCTTGGG
AATTTAAAGAAAGTATATTGGCTTTACTTGGCAGGCTCAAACTTGACAGGAGAAATCCCA
GAATCCATTTTTGAAATGGAGGCACTAGGAACATTGGATATTTCAAGAAATCAGATTTCT
GGGAATTTCCCCAAGTCTATAAACAAGCTGAAAAATTTATGGAAAATTGAGCTGTTTCAA
AATAAGTTGACAGGTGAACTTCCTGTAGAACTTGCAGACCTCTCTCTTTTGCAGGAATTT
GATATTTCCAGCAACCAGATGTACGGGAAGCTGCCCCCGGGAATCGGGAACCTGAAGAAG
TTAACAGTGTTTCAAATGTTCAAGAATAACTTCTCTGGTGAAATTCCTTCTGGTTTTGGA
GAAATGCAGCATCTTGATGCCTTTTCTGTGTACAGGAACAGTTTTTCTGGGGCATTTCCA
GCAAATCTTGGTCGGTTTTCGCCCCTGAATAGCATAGACATATCTGAAAACAAATTTAGT
GGTGCATTCCCAAAATACTTGTGCCAAAATGGCAACTTGCAGTTTTTGCTAGCTGTCGAA
AACAGTTTCTCAGGAGAGTTTCCAAGTACTTATTCCTCCTGCAAGCCTTTACAGAGATTG
AGGGTCAATAATAATCAACTTTCTGGGAAAATATCTGATGGTGTATGGGGACTTCCAAAT
GTGTTGATGCTGGATTTCAGTGACAATAAGTTCAGTGGAACTGTATCTCCTGAAATTGGG
GCTGCTACTAGCTTGAATCAGTTGGTGTTATCAAATAACAGATTTTCAGGTGAGATTCCA
AAAGAACTTGGAAAACTCACACAATTGGAAAGAATGTACTTGGATAACAATGAATTCTCG
GGCGCAATACCTTCTGAACTTGGTAAACTTAAGCAACTTTCATCTTTGCATTTGGAGAAG
AACTCGTTCTCAGGGGCAATCCCATCGGAATTGGCTGAATTTCGTAGACTTGCAGACCTG
AATCTTGCTTCAAATCTTCTTACAGGTAGCATTCCCAATTCCTTATCAACAATGACATCT
TTGAACTCTCTGAATCTTTCACACAACAGACTCACCGGTAAAATACCAACTAGCTTGGAC
AATCTGAAGCTGTCGTCGTTAGATCTCTCTGACAACCAGCTATCAGGAGAAGTTTTATTG
GATCTTTTAACAATGGGAGGAGATAAGGCATTTGCTGATAACAAGGGACTTTGTGTTGAC
GAAAGCATCAAATTCTCAATGAACTCAGGCTTGGGGGGTTGTGGCGGAAAGGCTGCTCAA
CACAAGTTAAACAAACTAGTTGTGTTTTGCATTGTGTTGCTTTCCTTATCTGTTTTAATG
GGCGGTTTATTGCTCGTCAGTTACCTAAACTACAAGCATAGTCATGAAACAGATCCTGAA
GAACAACAGGAGGAAGCCAAGGGAACAAATCCAAAATGGAAGCTAGAGAACTTCCACCAT
GTGGAATTTGATGCAGATGATGTTTGTGGTTTCGACGAGGACAATTTGATTGGAAGTGGA
GGTACAGGAAAAGTTTATCGGTTAGACTTGAAGAAAGGTTGTGGAACAGTAGCTGTGAAG
CAGCTGTGGAAAGGGAATGGTGTGAAAGTATTGACAAGGGAAATGGAAATTTTGGGGAAA
ATCAGGCACAGAAATATAGTAAAGTTGTATGCAAGTCTAATGAAAGAAGGTTCAAATTTC
TTGGTTTTCGAGTACATGCCAAATGGTAATCTTTTCGAGGCACTACACCGAGAGATCAAG
GCTGGCAAGCCGGAATTAGATTGGTACCAGAGATATAAAATAGCACTCGGAGCTGCAAAG
GGAATTGCTTATCTGCACCATGATTGTTGCCCTCCTATTATTCATAGAGATATTAAATCA
ACCAACATTCTACTTGATGAGGATTATGAAGCAAAAATTTCAGATTTTGGGGTTGCAAAA
GTCTCCGAAATTTCTTCTAGGGGATCCGAGCTCAGTTGTTTTGCAGGCACTCATGGTTAC
ATGGCTCCTGAAATGGCATATACTCTCAGAGTAACAGAAAAGAGCGACATTTACAGCTTT
GGCGTCGTGCTATTGGAACTAGTAACTGGAAGAAAACCAATAGAAGATACATTTGGAGAA
GGAAAAGACTTGGTCTACTGGACCTCAACTCATTTAAATGACAAGGAAAGCATTGTGAAA
GTTCTTGATCAGAAGGTGGTTTCTGAACTTGTTCAGGAAGACATGATCAAAGTGTTGAGA
ATCGCCACACTTTGTACAACGAAGCTTCCTAATTTGCGCCCCAACATGAAAGAAGTTGTC
AAGTTGCTTGTTGATGCTGAACCTTGGACATTTAGGTCTTCAAGCAAATCTGAAAAAAAG
GGGCACAATTTTTCTGAGGTCTAG

Peptide Sequence

PEP ID

XP_016503437.1
PEP Infomation

PREDICTED: receptor-like protein kinase HAIKU2 [Nicotiana tabacum]
Sequence

MTLLPFPISTMARIPKLQNSLQILAIFLFLVLFFQPSKSLTAETQALLHFKEQLNDPLNY
LDSWKDSESPCKFNGITCDQKTGLVTAISLDNKSISGVISPSIFSLQSLTSLVLPSNSLS
GVLPSEITNCTNLKILNVTGNNMNGTIPDLSKLTNLEVLDLSINYFSGEFPSWVGNLTSL
VALGLGDNDFVEGKIPETLGNLKKVYWLYLAGSNLTGEIPESIFEMEALGTLDISRNQIS
GNFPKSINKLKNLWKIELFQNKLTGELPVELADLSLLQEFDISSNQMYGKLPPGIGNLKK
LTVFQMFKNNFSGEIPSGFGEMQHLDAFSVYRNSFSGAFPANLGRFSPLNSIDISENKFS
GAFPKYLCQNGNLQFLLAVENSFSGEFPSTYSSCKPLQRLRVNNNQLSGKISDGVWGLPN
VLMLDFSDNKFSGTVSPEIGAATSLNQLVLSNNRFSGEIPKELGKLTQLERMYLDNNEFS
GAIPSELGKLKQLSSLHLEKNSFSGAIPSELAEFRRLADLNLASNLLTGSIPNSLSTMTS
LNSLNLSHNRLTGKIPTSLDNLKLSSLDLSDNQLSGEVLLDLLTMGGDKAFADNKGLCVD
ESIKFSMNSGLGGCGGKAAQHKLNKLVVFCIVLLSLSVLMGGLLLVSYLNYKHSHETDPE
EQQEEAKGTNPKWKLENFHHVEFDADDVCGFDEDNLIGSGGTGKVYRLDLKKGCGTVAVK
QLWKGNGVKVLTREMEILGKIRHRNIVKLYASLMKEGSNFLVFEYMPNGNLFEALHREIK
AGKPELDWYQRYKIALGAAKGIAYLHHDCCPPIIHRDIKSTNILLDEDYEAKISDFGVAK
VSEISSRGSELSCFAGTHGYMAPEMAYTLRVTEKSDIYSFGVVLLELVTGRKPIEDTFGE
GKDLVYWTSTHLNDKESIVKVLDQKVVSELVQEDMIKVLRIATLCTTKLPNLRPNMKEVV
KLLVDAEPWTFRSSSKSEKKGHNFSEV

Transcript Sequence

Gene sequence data has not been registered.